Phold Plot WebAssembly App

Upload a GenBank (.gbk) file from Phold, tweak your options and click Run.
This will run phold plot.
For more details about the parameters, please see phold's documentation.
You can also try the Example button for a pre-loaded example phage.
phold plot is run client-side using Wasm (WebAssembly) with Pyodide (Biopython + pyCirclize + matplotlib): no data leaves your machine.
If you encounter any problems, please leave an issue on GitHub.

Input GenBank file (.gbk, .gb)

If your file contains multiple contigs, checking Plot every contig will create one plot per contig.

Plot options

Prefix

Plot every contig Label hypothetical proteins Remove tRNA/tmRNA/CRISPR labels

Plot title (optional)

Title size Label size

Axis tick interval (bp) Truncate long labels to maximum this many characters

DPI (image quality) Annotations proportion (0-1)

Label IDs (optional, newline-separated)

Output format PNG (.png) SVG (.svg)

Choose one or both. If both are selected you'll get PNG + SVG.

Pyodide will be loaded on demand when you click Run.

Logs

(logs will appear here)

Phold Plot WebAssembly App

Logs

Plots